Hi, I'm Rafake

I'm a developer and bioinformatician passionate about computational biology. I created this website to share curated resources, tools, and insights from the intersection of software development and life sciences.

Education

Coursera Bioinformatics

Bioinformatics course.

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Coursera DNA Analysis

DNA analysis course supplement.

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GitHub – Variant Calling Lesson

NGS variant calling tutorial.

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Tools

DAVID Functional Annotation

Functional enrichment tool.

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DAVID Tools

DAVID tools overview.

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VEP – Variant Effect Predictor

Variant effect annotation.

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Ensembl REST API

Ensembl GRCh37 API.

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REST API (VEP)

REST endpoints for VEP.

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Rsamtools

Bioconductor SAM/BAM utilities.

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Nextflow

Workflow management system.

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Inside Hopsworks

Hopsworks documentation.

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Conferences

MLSB Workshop 2025

Machine Learning in Systems Biology workshop.

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NeurIPS 2025

Top ML conference.

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Resources

Iris Dataset (UCI ML Repo)

Classic dataset.

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